IL_11HV_100
3D structure
- PDB id
- 11HV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 60S ribosomal subunit with eEF2 domain IV open
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CGUAAC*GGAUAAG
- Length
- 13 nucleotides
- Bulged bases
- 11HV|1|28|U|2880
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_11HV_100 not in the Motif Atlas
- Homologous match to IL_8GLP_108
- Geometric discrepancy: 0.0615
- The information below is about IL_8GLP_108
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_20700.3
- Basepair signature
- cWW-tSH-L-R-tHH-tHS-cWW
- Number of instances in this motif group
- 11
Unit IDs
11HV|1|28|C|2867
11HV|1|28|G|2868
11HV|1|28|U|2869
11HV|1|28|A|2870
11HV|1|28|A|2871
11HV|1|28|C|2872
*
11HV|1|28|G|2877
11HV|1|28|G|2878
11HV|1|28|A|2879
11HV|1|28|U|2880
11HV|1|28|A|2881
11HV|1|28|A|2882
11HV|1|28|G|2883
Current chains
- Chain 28
- 28S rRNA
Nearby chains
- Chain ff
- 60S ribosomal protein L37a
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