IL_11HV_137
3D structure
- PDB id
- 11HV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 60S ribosomal subunit with eEF2 domain IV open
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CCAU*AGGCG
- Length
- 9 nucleotides
- Bulged bases
- 11HV|1|28|C|4720
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_11HV_137 not in the Motif Atlas
- Homologous match to IL_9AXU_107
- Geometric discrepancy: 0.1195
- The information below is about IL_9AXU_107
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_58355.4
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 45
Unit IDs
11HV|1|28|C|4582
11HV|1|28|C|4583
11HV|1|28|A|4584
11HV|1|28|U|4585
*
11HV|1|28|A|4717
11HV|1|28|G|4718
11HV|1|28|G|4719
11HV|1|28|C|4720
11HV|1|28|G|4721
Current chains
- Chain 28
- 28S rRNA
Nearby chains
- Chain L3
- 60S ribosomal protein L3
- Chain bb
- Large ribosomal subunit protein uL13
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