IL_11HV_162
3D structure
- PDB id
- 11HV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 60S ribosomal subunit with eEF2 domain IV open
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UUG*CUG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_11HV_162 not in the Motif Atlas
- Homologous match to IL_8QYX_170
- Geometric discrepancy: 0.058
- The information below is about IL_8QYX_170
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_01334.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 23
Unit IDs
11HV|1|5|U|79
11HV|1|5|U|80
11HV|1|5|G|81
*
11HV|1|5|C|95
11HV|1|5|U|96
11HV|1|5|G|97
Current chains
- Chain 5
- 5S rRNA
Nearby chains
- Chain 20
- Large ribosomal subunit protein eL20
- Chain 28
- Large subunit ribosomal RNA; LSU rRNA
- Chain L7
- 60S ribosomal protein L7
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