IL_11IQ_031
3D structure
- PDB id
- 11IQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S with eEF2,eIF5A and SERBP1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- GUGCCAG*CGGUAAUUC
- Length
- 16 nucleotides
- Bulged bases
- 11IQ|1|18|A|628, 11IQ|1|18|U|630, 11IQ|1|18|U|631
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_11IQ_031 not in the Motif Atlas
- Homologous match to IL_9H3G_187
- Geometric discrepancy: 0.1274
- The information below is about IL_9H3G_187
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_52042.3
- Basepair signature
- cWW-cSW-tWH-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 6
Unit IDs
11IQ|1|18|G|611
11IQ|1|18|U|612
11IQ|1|18|G|613
11IQ|1|18|C|614
11IQ|1|18|C|615
11IQ|1|18|A|616
11IQ|1|18|G|617
*
11IQ|1|18|C|624
11IQ|1|18|G|625
11IQ|1|18|G|626
11IQ|1|18|U|627
11IQ|1|18|A|628
11IQ|1|18|A|629
11IQ|1|18|U|630
11IQ|1|18|U|631
11IQ|1|18|C|632
Current chains
- Chain 18
- 18S rRNA
Nearby chains
- Chain RB
- SERBP1
- Chain RR
- 40S ribosomal protein S23
- Chain S3
- 40S ribosomal protein S3
- Chain YY
- 40S ribosomal protein S30
- Chain v
- Elongation factor 2
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