IL_11IQ_053
3D structure
- PDB id
- 11IQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S with eEF2,eIF5A and SERBP1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- GA*UAC
- Length
- 5 nucleotides
- Bulged bases
- 11IQ|1|18|A|1695
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_11IQ_053 not in the Motif Atlas
- Homologous match to IL_9PN5_195
- Geometric discrepancy: 0.0906
- The information below is about IL_9PN5_195
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_14190.4
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 175
Unit IDs
11IQ|1|18|G|1203
11IQ|1|18|A|1204
*
11IQ|1|18|U|1694
11IQ|1|18|A|1695
11IQ|1|18|C|1696
Current chains
- Chain 18
- 18S rRNA
Nearby chains
- Chain RB
- SERBP1
- Chain S2
- 40S ribosomal protein S2
- Chain UU
- eS26
Coloring options: