IL_11IQ_167
3D structure
- PDB id
- 11IQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S with eEF2,eIF5A and SERBP1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- CGC*GGUG
- Length
- 7 nucleotides
- Bulged bases
- 11IQ|1|28|G|2343
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_11IQ_167 not in the Motif Atlas
- Homologous match to IL_8GLP_084
- Geometric discrepancy: 0.0411
- The information below is about IL_8GLP_084
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_84227.1
- Basepair signature
- cWW-cWS-cWW
- Number of instances in this motif group
- 20
Unit IDs
11IQ|1|28|C|2290
11IQ|1|28|G|2291
11IQ|1|28|C|2292
*
11IQ|1|28|G|2342
11IQ|1|28|G|2343
11IQ|1|28|U|2344
11IQ|1|28|G|2345
Current chains
- Chain 28
- 28S rRNA
Nearby chains
- Chain 32
- Large ribosomal subunit protein eL32
- Chain 58
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain L4
- 60S ribosomal protein L4
- Chain dd
- 60S ribosomal protein L27a
- Chain gg
- 60S ribosomal protein L28
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