IL_11IQ_191

3D structure

PDB id

11IQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S with eEF2,eIF5A and SERBP1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

GG*CGAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_11IQ_191 not in the Motif Atlas

Homologous match to IL_8GLP_110

Geometric discrepancy: 0.1083

The information below is about IL_8GLP_110

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_18824.3

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

4

Unit IDs

11IQ|1|28|G|2896
11IQ|1|28|G|2897
*
11IQ|1|28|C|3602
11IQ|1|28|G|3603
11IQ|1|28|A|3604
11IQ|1|28|C|3605

Current chains

Chain 28

28S rRNA

Nearby chains

Chain 19

60S ribosomal protein L19