IL_11IQ_207
3D structure
- PDB id
- 11IQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S with eEF2,eIF5A and SERBP1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- GA*UAC
- Length
- 5 nucleotides
- Bulged bases
- 11IQ|1|28|A|4203
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_11IQ_207 not in the Motif Atlas
- Homologous match to IL_8GLP_137
- Geometric discrepancy: 0.0513
- The information below is about IL_8GLP_137
- Detailed Annotation
- AG tHS outside loop
- Broad Annotation
- AG tHS outside loop
- Motif group
- IL_14190.4
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 175
Unit IDs
11IQ|1|28|G|4191
11IQ|1|28|A|4192
*
11IQ|1|28|U|4202
11IQ|1|28|A|4203
11IQ|1|28|C|4204
Current chains
- Chain 28
- 28S rRNA
Nearby chains
- Chain 10
- Ribosomal protein L10
- Chain 21
- 60S ribosomal protein L21
- Chain 29
- Large ribosomal subunit protein eL29
- Chain 42
- eL42
- Chain B
- Eukaryotic translation initiation factor 5A-1
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