IL_11IQ_229
3D structure
- PDB id
- 11IQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S with eEF2,eIF5A and SERBP1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- UGUAUG*CGAAG
- Length
- 11 nucleotides
- Bulged bases
- 11IQ|1|28|U|4634, 11IQ|1|28|U|4636
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_11IQ_229 not in the Motif Atlas
- Homologous match to IL_8GLP_318
- Geometric discrepancy: 0.1997
- The information below is about IL_8GLP_318
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_43276.1
- Basepair signature
- cWW-L-R-tHW-L-cWW
- Number of instances in this motif group
- 5
Unit IDs
11IQ|1|28|U|4632
11IQ|1|28|G|4633
11IQ|1|28|U|4634
11IQ|1|28|A|4635
11IQ|1|28|U|4636
11IQ|1|28|G|4637
*
11IQ|1|28|C|4662
11IQ|1|28|G|4663
11IQ|1|28|A|4664
11IQ|1|28|A|4665
11IQ|1|28|G|4666
Current chains
- Chain 28
- 28S rRNA
Nearby chains
- Chain 24
- Large ribosomal subunit protein eL24
- Chain 31
- 60S ribosomal protein L31
- Chain L3
- 60S ribosomal protein L3
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