IL_11KH_009
3D structure
- PDB id
- 11KH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S with IFRD2 and LARP1, 40S head-swiveled
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UCCUUU*AUUCG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_11KH_009 not in the Motif Atlas
- Homologous match to IL_9H3G_164
- Geometric discrepancy: 0.1918
- The information below is about IL_9H3G_164
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_31545.3
- Basepair signature
- cWW-L-R-L-R-L-cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
11KH|1|18|U|116
11KH|1|18|C|117
11KH|1|18|C|118
11KH|1|18|U|119
11KH|1|18|U|120
11KH|1|18|U|121
*
11KH|1|18|A|343
11KH|1|18|U|344
11KH|1|18|U|345
11KH|1|18|C|346
11KH|1|18|G|347
Current chains
- Chain 18
- 18S rRNA
Nearby chains
- Chain S4
- 40S ribosomal protein S4
- Chain S8
- 40S ribosomal protein S8
Coloring options: