IL_11KH_129
3D structure
- PDB id
- 11KH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S with IFRD2 and LARP1, 40S head-swiveled
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GGAUC*GCGCAC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_11KH_129 not in the Motif Atlas
- Homologous match to IL_8GLP_051
- Geometric discrepancy: 0.0954
- The information below is about IL_8GLP_051
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_47352.3
- Basepair signature
- cWW-cWW-tSH-L-R-L-cWW
- Number of instances in this motif group
- 8
Unit IDs
11KH|1|28|G|1425
11KH|1|28|G|1426
11KH|1|28|A|1427
11KH|1|28|U|1428
11KH|1|28|C|1429
*
11KH|1|28|G|1455
11KH|1|28|C|1456
11KH|1|28|G|1457
11KH|1|28|C|1458
11KH|1|28|A|1459
11KH|1|28|C|1460
Current chains
- Chain 28
- 28S rRNA
Nearby chains
- Chain 29
- Large ribosomal subunit protein eL29
- Chain Q
- Large ribosomal subunit protein eL18
Coloring options: