IL_8GLP_051

3D structure

PDB id

8GLP (explore in PDB, NAKB, or RNA 3D Hub)

Description

mRNA decoding in human is kinetically and structurally distinct from bacteria (Consensus LSU focused refined structure)

Experimental method

ELECTRON MICROSCOPY

Resolution

1.67 Å

Loop

Sequence

GGAUC*GCGCAC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_47352.1

Basepair signature

cWW-cWW-L-R-tHS-L-cWW

Number of instances in this motif group

4

Unit IDs

8GLP|1|L5|G|1425
8GLP|1|L5|G|1426
8GLP|1|L5|A|1427
8GLP|1|L5|U|1428
8GLP|1|L5|C|1429
*
8GLP|1|L5|G|1455
8GLP|1|L5|C|1456
8GLP|1|L5|G|1457
8GLP|1|L5|C|1458
8GLP|1|L5|A|1459
8GLP|1|L5|C|1460

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LQ

60S ribosomal protein L18

Chain Lb

60S ribosomal protein L29