IL_1FFK_046
3D structure
- PDB id
- 1FFK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYSTAL STRUCTURE OF THE LARGE RIBOSOMAL SUBUNIT FROM HALOARCULA MARISMORTUI AT 2.4 ANGSTROM RESOLUTION
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.4 Å
Loop
- Sequence
- GAUGGAAG*UGGAC
- Length
- 13 nucleotides
- Bulged bases
- 1FFK|1|0|G|1315
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_1FFK_046 not in the Motif Atlas
- Homologous match to IL_4V9F_048
- Geometric discrepancy: 0.0305
- The information below is about IL_4V9F_048
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_90775.2
- Basepair signature
- cWW-tSS-tSH-L-tHS-tHS-cWW
- Number of instances in this motif group
- 30
Unit IDs
1FFK|1|0|G|1312
1FFK|1|0|A|1313
1FFK|1|0|U|1314
1FFK|1|0|G|1315
1FFK|1|0|G|1316
1FFK|1|0|A|1317
1FFK|1|0|A|1318
1FFK|1|0|G|1319
*
1FFK|1|0|U|1338
1FFK|1|0|G|1339
1FFK|1|0|G|1340
1FFK|1|0|A|1341
1FFK|1|0|C|1342
Current chains
- Chain 0
- 23S RRNA
Nearby chains
- Chain C
- RIBOSOMAL PROTEIN L4
- Chain V
- RIBOSOMAL PROTEIN L32E
Coloring options: