IL_1FG0_003

3D structure

PDB id

1FG0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

LARGE RIBOSOMAL SUBUNIT COMPLEXED WITH A 13 BP MINIHELIX-PUROMYCIN COMPOUND

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CUAUG*CUAG

Length

9 nucleotides

Bulged bases

1FG0|1|A|U|2109

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_1FG0_003 not in the Motif Atlas

Geometric match to IL_1JID_002

Geometric discrepancy: 0.2815

The information below is about IL_1JID_002

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_85033.2

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

35

Unit IDs

1FG0|1|A|C|2106
1FG0|1|A|U|2107
1FG0|1|A|A|2108
1FG0|1|A|U|2109
1FG0|1|A|G|2110
*
1FG0|1|A|C|2477
1FG0|1|A|U|2478
1FG0|1|A|A|2479
1FG0|1|A|G|2480

Current chains

Chain A

23S RIBOSOMAL RNA

Nearby chains