IL_1G1X_006

3D structure

PDB id

1G1X (explore in PDB, NAKB, or RNA 3D Hub)

Description

STRUCTURE OF RIBOSOMAL PROTEINS S15, S6, S18, AND 16S RIBOSOMAL RNA

Experimental method

X-RAY DIFFRACTION

Resolution

2.6 Å

Loop

Sequence

GAGAG*UGGU

Length

9 nucleotides

Bulged bases

1G1X|1|I|A|665

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_85033.2

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

35

Unit IDs

1G1X|1|I|G|662
1G1X|1|I|A|663
1G1X|1|I|G|664
1G1X|1|I|A|665
1G1X|1|I|G|666
*
1G1X|1|J|U|740
1G1X|1|J|G|741
1G1X|1|J|G|742
1G1X|1|J|U|743

Current chains

Chain I

16S RIBOSOMAL RNA

Chain J

16S RIBOSOMAL RNA

Nearby chains

Chain F

30S RIBOSOMAL PROTEIN S6

Chain G

30S RIBOSOMAL PROTEIN S15

Chain H

30S RIBOSOMAL PROTEIN S18