IL_1GID_008

3D structure

PDB id

1GID (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF A GROUP I RIBOZYME DOMAIN: PRINCIPLES OF RNA PACKING

Experimental method

X-RAY DIFFRACTION

Resolution

2.5 Å

Loop

Sequence

GAAUU*AGCC

Length

9 nucleotides

Bulged bases

1GID|1|B|U|106

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_85033.1

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

36

Unit IDs

1GID|1|B|G|103
1GID|1|B|A|104
1GID|1|B|A|105
1GID|1|B|U|106
1GID|1|B|U|107
*
1GID|1|B|A|214
1GID|1|B|G|215
1GID|1|B|C|216
1GID|1|B|C|217

Current chains

Chain B

P4-P6 RNA RIBOZYME DOMAIN

Nearby chains

Chain A

P4-P6 RNA RIBOZYME DOMAIN