IL_1I95_064

3D structure

PDB id

1I95 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH EDEINE

Experimental method

X-RAY DIFFRACTION

Resolution

4.5 Å

Loop

Sequence

GCAAUG*UGAC

Length

10 nucleotides

Bulged bases

1I95|1|A|G|383

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_1I95_064 not in the Motif Atlas

Geometric match to IL_4V88_408

Geometric discrepancy: 0.2024

The information below is about IL_4V88_408

Detailed Annotation

C-loop with extra cWW pair

Broad Annotation

C-loop

Motif group

IL_11347.2

Basepair signature

cWW-cWW-L-cWW-L

Number of instances in this motif group

3

Unit IDs

1I95|1|A|G|366
1I95|1|A|C|367
1I95|1|A|A|368
1I95|1|A|A|369
1I95|1|A|U|370
1I95|1|A|G|371
*
1I95|1|A|U|382
1I95|1|A|G|383
1I95|1|A|A|384
1I95|1|A|C|385

Current chains

Chain A

16S RRNA

Nearby chains

Chain P

30S RIBOSOMAL PROTEIN S16