IL_1I96_056
3D structure
- PDB id
- 1I96 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH THE TRANSLATION INITIATION FACTOR IF3 (C-TERMINAL DOMAIN)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 4.2 Å
Loop
- Sequence
- CGGAUU*AUGAAG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_1I96_056 not in the Motif Atlas
- Homologous match to IL_4LFB_055
- Geometric discrepancy: 0.1301
- The information below is about IL_4LFB_055
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_57885.3
- Basepair signature
- cWW-tSH-tSH-tHS-cWW-cWW
- Number of instances in this motif group
- 8
Unit IDs
1I96|1|A|C|1284
1I96|1|A|G|1285
1I96|1|A|G|1286
1I96|1|A|A|1287
1I96|1|A|U|1288
1I96|1|A|U|1289
*
1I96|1|A|A|1310
1I96|1|A|U|1311
1I96|1|A|G|1312
1I96|1|A|A|1313
1I96|1|A|A|1314
1I96|1|A|G|1315
Current chains
- Chain A
- 16S RRNA
Nearby chains
- Chain M
- 30S RIBOSOMAL PROTEIN S13
- Chain S
- 30S RIBOSOMAL PROTEIN S19
- Chain U
- 30S RIBOSOMAL PROTEIN THX
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