IL_1I97_105
3D structure
- PDB id
- 1I97 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYSTAL STRUCTURE OF THE 30S RIBOSOMAL SUBUNIT FROM THERMUS THERMOPHILUS IN COMPLEX WITH TETRACYCLINE
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 4.5 Å
Loop
- Sequence
- UGG*UCAGCA
- Length
- 9 nucleotides
- Bulged bases
- 1I97|1|A|A|1182
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_1I97_105 not in the Motif Atlas
- Geometric match to IL_4V88_451
- Geometric discrepancy: 0.2354
- The information below is about IL_4V88_451
- Detailed Annotation
- Minor groove platform with extra cWW
- Broad Annotation
- Minor groove platform
- Motif group
- IL_97255.1
- Basepair signature
- cWW-tSH-L-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
1I97|1|A|U|1038
1I97|1|A|G|1039
1I97|1|A|G|1040
*
1I97|1|A|U|1180
1I97|1|A|C|1181
1I97|1|A|A|1182
1I97|1|A|G|1183
1I97|1|A|C|1184
1I97|1|A|A|1185
Current chains
- Chain A
- 16S RRNA
Nearby chains
- Chain C
- 30S RIBOSOMAL PROTEIN S3
- Chain J
- 30S RIBOSOMAL PROTEIN S10
- Chain N
- 30S RIBOSOMAL PROTEIN S14
Coloring options: