3D structure

PDB id
1J2B (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure Of Archaeosine tRNA-Guanine Transglycosylase Complexed With lambda-form tRNA(Val)
Experimental method
X-RAY DIFFRACTION
Resolution
3.3 Å

Loop

Sequence
GAC*GUC
Length
6 nucleotides
Bulged bases
None detected
QA status
Self-complementary: GAC,GUC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_1J2B_002 not in the Motif Atlas
Geometric match to IL_2ZNI_001
Geometric discrepancy: 0.1956
The information below is about IL_2ZNI_001
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_86319.3
Basepair signature
cWW-cWW-cWW
Number of instances in this motif group
269

Unit IDs

1J2B|1|D|G|924
1J2B|1|D|A|925
1J2B|1|D|C|926
*
1J2B|1|D|G|947
1J2B|1|D|U|948
1J2B|1|D|C|949

Current chains

Chain D
tRNA(Val)

Nearby chains

Chain B
Archaeosine tRNA-guanine transglycosylase

Coloring options:


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