IL_1LDZ_002

3D structure

PDB id

1LDZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

SOLUTION STRUCTURE OF THE LEAD-DEPENDENT RIBOZYME, NMR, 25 STRUCTURES

Experimental method

SOLUTION NMR

Resolution

Loop

Sequence

GCG*CGC

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary: GCG,CGC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_1LDZ_002 not in the Motif Atlas

Geometric match to IL_4M4O_001

Geometric discrepancy: 0.3364

The information below is about IL_4M4O_001

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.5

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

238

Unit IDs

1LDZ|2|A|G|1
1LDZ|2|A|C|2
1LDZ|2|A|G|3
*
1LDZ|2|A|C|28
1LDZ|2|A|G|29
1LDZ|2|A|C|30

Current chains

Chain A

LEAD-DEPENDENT RIBOZYME

Nearby chains