IL_1N36_010
3D structure
- PDB id
- 1N36 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Thermus thermophilus 30S ribosomal subunit in the presence of crystallographically disordered codon and near-cognate transfer RNA anticodon stem-loop mismatched at the second codon position
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.65 Å
Loop
- Sequence
- GGACAAC*GCUAAUCC
- Length
- 15 nucleotides
- Bulged bases
- 1N36|1|A|U|173
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_1N36_010 not in the Motif Atlas
- Geometric match to IL_4V88_394
- Geometric discrepancy: 0.237
- The information below is about IL_4V88_394
- Detailed Annotation
- tWH-tWH-tHW-tHW
- Broad Annotation
- No text annotation
- Motif group
- IL_80604.3
- Basepair signature
- cWW-cWW-tWH-tWH-tHW-L-R-cWW
- Number of instances in this motif group
- 4
Unit IDs
1N36|1|A|G|147
1N36|1|A|G|148
1N36|1|A|A|149
1N36|1|A|C|150
1N36|1|A|A|151
1N36|1|A|A|152
1N36|1|A|C|153
*
1N36|1|A|G|168
1N36|1|A|C|169
1N36|1|A|U|170
1N36|1|A|A|171
1N36|1|A|A|172
1N36|1|A|U|173
1N36|1|A|C|174
1N36|1|A|C|175
Current chains
- Chain A
- 16S RIBOSOMAL RNA
Nearby chains
- Chain T
- 30S RIBOSOMAL PROTEIN S20
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