IL_1N36_063
3D structure
- PDB id
- 1N36 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Thermus thermophilus 30S ribosomal subunit in the presence of crystallographically disordered codon and near-cognate transfer RNA anticodon stem-loop mismatched at the second codon position
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.65 Å
Loop
- Sequence
- CUA*UAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary: CUA,UAG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_1N36_063 not in the Motif Atlas
- Homologous match to IL_4LFB_061
- Geometric discrepancy: 0.3049
- The information below is about IL_4LFB_061
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_86319.3
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 269
Unit IDs
1N36|1|A|C|1426
1N36|1|A|U|1427
1N36|1|A|A|1428
*
1N36|1|A|U|1472
1N36|1|A|A|1473
1N36|1|A|G|1474
Current chains
- Chain A
- 16S RIBOSOMAL RNA
Nearby chains
No other chains within 10ÅColoring options: