IL_1N36_066
3D structure
- PDB id
- 1N36 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Thermus thermophilus 30S ribosomal subunit in the presence of crystallographically disordered codon and near-cognate transfer RNA anticodon stem-loop mismatched at the second codon position
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.65 Å
Loop
- Sequence
- CGGGAG*CAG
- Length
- 9 nucleotides
- Bulged bases
- 1N36|1|A|G|1443
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_1N36_066 not in the Motif Atlas
- Homologous match to IL_4LFB_064
- Geometric discrepancy: 0.2915
- The information below is about IL_4LFB_064
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_49061.1
- Basepair signature
- cWW-L-R-L-cWW-L
- Number of instances in this motif group
- 6
Unit IDs
1N36|1|A|C|1440
1N36|1|A|G|1441
1N36|1|A|G|1442
1N36|1|A|G|1443
1N36|1|A|A|1446
1N36|1|A|G|1447
*
1N36|1|A|C|1459
1N36|1|A|A|1460
1N36|1|A|G|1461
Current chains
- Chain A
- 16S RIBOSOMAL RNA
Nearby chains
- Chain T
- 30S RIBOSOMAL PROTEIN S20
Coloring options: