IL_1NKW_073
3D structure
- PDB id
- 1NKW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure Of The Large Ribosomal Subunit From Deinococcus Radiodurans
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- ACUUUG*CUGU
- Length
- 10 nucleotides
- Bulged bases
- 1NKW|1|0|G|1975
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_1NKW_073 not in the Motif Atlas
- Homologous match to IL_7RQB_067
- Geometric discrepancy: 0.1824
- The information below is about IL_7RQB_067
- Detailed Annotation
- Intercalated tWH
- Broad Annotation
- Intercalated tWH
- Motif group
- IL_76273.1
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 14
Unit IDs
1NKW|1|0|A|1686
1NKW|1|0|C|1687
1NKW|1|0|U|1688
1NKW|1|0|U|1689
1NKW|1|0|U|1690
1NKW|1|0|G|1691
*
1NKW|1|0|C|1973
1NKW|1|0|U|1974
1NKW|1|0|G|1975
1NKW|1|0|U|1976
Current chains
- Chain 0
- 23S ribosomal RNA
Nearby chains
- Chain B
- 50S ribosomal protein L3
- Chain I
- 50S ribosomal protein L14
Coloring options: