IL_1NKW_125
3D structure
- PDB id
- 1NKW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure Of The Large Ribosomal Subunit From Deinococcus Radiodurans
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CGG*CCG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary: CGG,CCG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_1NKW_125 not in the Motif Atlas
- Geometric match to IL_3R1C_017
- Geometric discrepancy: 0.1967
- The information below is about IL_3R1C_017
- Detailed Annotation
- Isolated cWH basepair
- Broad Annotation
- No text annotation
- Motif group
- IL_10167.6
- Basepair signature
- cWW-cHW-cWW
- Number of instances in this motif group
- 51
Unit IDs
1NKW|1|0|C|2792
1NKW|1|0|G|2793
1NKW|1|0|G|2794
*
1NKW|1|0|C|2802
1NKW|1|0|C|2803
1NKW|1|0|G|2804
Current chains
- Chain 0
- 23S ribosomal RNA
Nearby chains
- Chain B
- 50S ribosomal protein L3
- Chain L
- 50S ribosomal protein L17
- Chain N
- 50S ribosomal protein L19
- Chain Z
- 50S ribosomal protein L32
Coloring options: