IL_1NWY_011

3D structure

PDB id

1NWY (explore in PDB, NAKB, or RNA 3D Hub)

Description

COMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH AZITHROMYCIN

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CAAG*CGAACG

Length

10 nucleotides

Bulged bases

1NWY|1|0|C|358

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_1NWY_011 not in the Motif Atlas

Homologous match to IL_7A0S_008

Geometric discrepancy: 0.5709

The information below is about IL_7A0S_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_05192.8

Basepair signature

cWW-L-R-L-R-L-cWW-L

Number of instances in this motif group

3

Unit IDs

1NWY|1|0|C|303
1NWY|1|0|A|304
1NWY|1|0|A|305
1NWY|1|0|G|306
*
1NWY|1|0|C|354
1NWY|1|0|G|355
1NWY|1|0|A|356
1NWY|1|0|A|357
1NWY|1|0|C|358
1NWY|1|0|G|359

Current chains

Chain 0

23S RIBOSOMAL RRNA

Nearby chains

Chain S

ribosomal protein L24