IL_1NWY_112
3D structure
- PDB id
- 1NWY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- COMPLEX OF THE LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS WITH AZITHROMYCIN
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- CUAGUAC*GGACCG
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_1NWY_112 not in the Motif Atlas
- Geometric match to IL_4V9F_019
- Geometric discrepancy: 0.2555
- The information below is about IL_4V9F_019
- Detailed Annotation
- 7x6 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_16458.6
- Basepair signature
- cWW-L-R-L-R-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 6
Unit IDs
1NWY|1|0|C|2631
1NWY|1|0|U|2632
1NWY|1|0|A|2633
1NWY|1|0|G|2634
1NWY|1|0|U|2635
1NWY|1|0|A|2636
1NWY|1|0|C|2637
*
1NWY|1|0|G|2642
1NWY|1|0|G|2643
1NWY|1|0|A|2644
1NWY|1|0|C|2645
1NWY|1|0|C|2646
1NWY|1|0|G|2647
Current chains
- Chain 0
- 23S RIBOSOMAL RRNA
Nearby chains
- Chain E
- ribosomal protein L6
- Chain I
- ribosomal protein L14
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