IL_1QZW_002
3D structure
- PDB id
- 1QZW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the complete core of archaeal SRP and implications for inter-domain communication
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 4.1 Å
Loop
- Sequence
- GCCAGGC*GAGCAAC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_1QZW_002 not in the Motif Atlas
- Geometric match to IL_3NDB_008
- Geometric discrepancy: 0.2214
- The information below is about IL_3NDB_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_65851.3
- Basepair signature
- cWW-cWW-cWW-cWW-R-tHW-tSH-tHS-L
- Number of instances in this motif group
- 2
Unit IDs
1QZW|1|B|G|193
1QZW|1|B|C|194
1QZW|1|B|C|195
1QZW|1|B|A|196
1QZW|1|B|G|197
1QZW|1|B|G|198
1QZW|1|B|C|199
*
1QZW|1|B|G|208
1QZW|1|B|A|209
1QZW|1|B|G|210
1QZW|1|B|C|211
1QZW|1|B|A|212
1QZW|1|B|A|213
1QZW|1|B|C|214
Current chains
- Chain B
- 7S RNA
Nearby chains
- Chain A
- Signal recognition 54 kDa protein
Coloring options: