IL_1U9S_005

3D structure

PDB id

1U9S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the specificity domain of Ribonuclease P of the A-type

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CAGC*GG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

Minor groove platform, major groove intercalation

Broad Annotation

Minor groove platform, major groove intercalation

Motif group

IL_58310.2

Basepair signature

cWW-tHS-cWW

Number of instances in this motif group

24

Unit IDs

1U9S|1|A|C|136
1U9S|1|A|A|137
1U9S|1|A|G|138
1U9S|1|A|C|139
*
1U9S|1|A|G|161
1U9S|1|A|G|162

Current chains

Chain A

RIBONUCLEASE P

Nearby chains