IL_1VWW_006
3D structure
- PDB id
- 1VWW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mammalian 60S ribosomal subunit. This entry contains the large subunit ribosomal RNA.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- UCCCCGC*GCGCGGGA
- Length
- 15 nucleotides
- Bulged bases
- 1VWW|1|5|C|126, 1VWW|1|5|C|143
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_79636.1
- Basepair signature
- cWW-L-R-R-R-R-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
1VWW|1|5|U|122
1VWW|1|5|C|123
1VWW|1|5|C|124
1VWW|1|5|C|125
1VWW|1|5|C|126
1VWW|1|5|G|127
1VWW|1|5|C|128
*
1VWW|1|5|G|140
1VWW|1|5|C|141
1VWW|1|5|G|142
1VWW|1|5|C|143
1VWW|1|5|G|144
1VWW|1|5|G|145
1VWW|1|5|G|146
1VWW|1|5|A|147
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain 8
- 5.8S ribosomal RNA
Coloring options: