IL_1VWW_141

3D structure

PDB id

1VWW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian 60S ribosomal subunit. This entry contains the large subunit ribosomal RNA.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UGUUGC*GGAACG

Length

12 nucleotides

Bulged bases

None detected

QA status

QA data not found

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_58261.1

Basepair signature

cWW-cWW-tSH-tHS-tHS-cWW

Number of instances in this motif group

14

Unit IDs

1VWW|1|5|U|4577
1VWW|1|5|G|4578
1VWW|1|5|U|4579
1VWW|1|5|U|4580
1VWW|1|5|G|4581
1VWW|1|5|C|4582
*
1VWW|1|5|G|4721
1VWW|1|5|G|4722
1VWW|1|5|A|4723
1VWW|1|5|A|4724
1VWW|1|5|C|4725
1VWW|1|5|G|4726

Current chains

Chain 5

28S ribosomal RNA

Nearby chains