IL_1Z58_033

3D structure

PDB id

1Z58 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of a complex of the ribosome large subunit with rapamycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

CUG*UAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_1Z58_033 not in the Motif Atlas

Geometric match to IL_4LFB_010

Geometric discrepancy: 0.1855

The information below is about IL_4LFB_010

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.5

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

238

Unit IDs

1Z58|1|2|C|959
1Z58|1|2|U|960
1Z58|1|2|G|961
*
1Z58|1|2|U|978
1Z58|1|2|A|979
1Z58|1|2|G|980

Current chains

Chain 2

23S RIBOSOMAL RNA

Nearby chains