IL_1Z58_127

3D structure

PDB id

1Z58 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of a complex of the ribosome large subunit with rapamycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

CGGUGCC*GUCUCG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_1Z58_127 not in the Motif Atlas

Geometric match to IL_6CZR_369

Geometric discrepancy: 0.3971

The information below is about IL_6CZR_369

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_71294.1

Basepair signature

cWW-cWW-L-R-L-R-cWW-cWW

Number of instances in this motif group

3

Unit IDs

1Z58|1|2|C|750
1Z58|1|2|G|751
1Z58|1|2|G|752
1Z58|1|2|U|753
1Z58|1|2|G|754
1Z58|1|2|C|755
1Z58|1|2|C|756
*
1Z58|1|2|G|767
1Z58|1|2|U|768
1Z58|1|2|C|769
1Z58|1|2|U|770
1Z58|1|2|C|771
1Z58|1|2|G|772

Current chains

Chain 2

23S RIBOSOMAL RNA

Nearby chains