IL_1Z58_156

3D structure

PDB id

1Z58 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of a complex of the ribosome large subunit with rapamycin

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

CUCAGUG*CUCAAG

Length

13 nucleotides

Bulged bases

1Z58|1|2|C|1031, 1Z58|1|2|C|1152, 1Z58|1|2|A|1153, 1Z58|1|2|A|1154

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_1Z58_156 not in the Motif Atlas

Homologous match to IL_7A0S_036

Geometric discrepancy: 0.4735

The information below is about IL_7A0S_036

Detailed Annotation

Kink-turn related

Broad Annotation

No text annotation

Motif group

IL_57188.6

Basepair signature

cWW-tWW-L-tWW-cWW-cSH

Number of instances in this motif group

6

Unit IDs

1Z58|1|2|C|1029
1Z58|1|2|U|1030
1Z58|1|2|C|1031
1Z58|1|2|A|1032
1Z58|1|2|G|1033
1Z58|1|2|U|1034
1Z58|1|2|G|1035
*
1Z58|1|2|C|1150
1Z58|1|2|U|1151
1Z58|1|2|C|1152
1Z58|1|2|A|1153
1Z58|1|2|A|1154
1Z58|1|2|G|1155

Current chains

Chain 2

23S RIBOSOMAL RNA

Nearby chains