IL_22TU_260

3D structure

PDB id

22TU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 80S ribosome in complex with DHX29

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CGCU*AAAAG

Length

9 nucleotides

Bulged bases

22TU|1|S2|A|1825

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

22TU|1|S2|C|1708
22TU|1|S2|G|1709
22TU|1|S2|C|1710
22TU|1|S2|U|1711
*
22TU|1|S2|A|1822
22TU|1|S2|A|1823
22TU|1|S2|A|1824
22TU|1|S2|A|1825
22TU|1|S2|G|1826

Current chains

Chain S2

18S rRNA

Nearby chains

Chain L5

Large subunit ribosomal RNA; LSU rRNA

Chain Ln

60S ribosomal protein L41

Chain SX

40S ribosomal protein S23

Chain Se

Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein