IL_23WI_020
3D structure
- PDB id
- 23WI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Subtomogram average of 70S ribosome (11x11) using CRYO ARM 300II
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- CCCAGACAG*UCGAG
- Length
- 14 nucleotides
- Bulged bases
- 23WI|1|5|C|1045, 23WI|1|5|A|1046
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_23WI_020 not in the Motif Atlas
- Geometric match to IL_4V9F_042
- Geometric discrepancy: 0.2509
- The information below is about IL_4V9F_042
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_99692.4
- Basepair signature
- cWW-tSS-tSH-L-R-R-L-cWW-L-L
- Number of instances in this motif group
- 5
Unit IDs
23WI|1|5|C|1043
23WI|1|5|C|1044
23WI|1|5|C|1045
23WI|1|5|A|1046
23WI|1|5|G|1047
23WI|1|5|A|1048
23WI|1|5|C|1049
23WI|1|5|A|1050
23WI|1|5|G|1051
*
23WI|1|5|U|1108
23WI|1|5|C|1109
23WI|1|5|G|1110
23WI|1|5|A|1111
23WI|1|5|G|1112
Current chains
- Chain 5
- RNA (2014-MER)
Nearby chains
- Chain 4
- 50S ribosomal protein L36
- Chain G
- Large ribosomal subunit protein uL6
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