IL_23WI_024
3D structure
- PDB id
- 23WI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Subtomogram average of 70S ribosome (11x11) using CRYO ARM 300II
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- CUGCGAAG*UGGAG
- Length
- 13 nucleotides
- Bulged bases
- 23WI|1|5|C|1211
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_23WI_024 not in the Motif Atlas
- Homologous match to IL_7A0S_043
- Geometric discrepancy: 0.1839
- The information below is about IL_7A0S_043
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_90775.3
- Basepair signature
- cWW-tSS-tSH-L-tHS-tHS-cWW
- Number of instances in this motif group
- 30
Unit IDs
23WI|1|5|C|1208
23WI|1|5|U|1209
23WI|1|5|G|1210
23WI|1|5|C|1211
23WI|1|5|G|1212
23WI|1|5|A|1213
23WI|1|5|A|1214
23WI|1|5|G|1215
*
23WI|1|5|U|1234
23WI|1|5|G|1235
23WI|1|5|G|1236
23WI|1|5|A|1237
23WI|1|5|G|1238
Current chains
- Chain 5
- RNA (2014-MER)
Nearby chains
- Chain A
- Small subunit ribosomal RNA; SSU rRNA
- Chain Q
- 50S ribosomal protein L20
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