IL_23WI_073
3D structure
- PDB id
- 23WI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Subtomogram average of 70S ribosome (11x11) using CRYO ARM 300II
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- CCAAG*CGACG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_23WI_073 not in the Motif Atlas
- Homologous match to IL_7A0S_087
- Geometric discrepancy: 0.1492
- The information below is about IL_7A0S_087
- Detailed Annotation
- Double sheared with non-canonical cWW
- Broad Annotation
- Double sheared
- Motif group
- IL_87767.4
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 19
Unit IDs
23WI|1|5|C|2466
23WI|1|5|C|2467
23WI|1|5|A|2468
23WI|1|5|A|2469
23WI|1|5|G|2470
*
23WI|1|5|C|2480
23WI|1|5|G|2481
23WI|1|5|A|2482
23WI|1|5|C|2483
23WI|1|5|G|2484
Current chains
- Chain 5
- RNA (2014-MER)
Nearby chains
- Chain 4
- 50S ribosomal protein L36
- Chain M
- 50S ribosomal protein L16
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