IL_23WI_089
3D structure
- PDB id
- 23WI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Subtomogram average of 70S ribosome (11x11) using CRYO ARM 300II
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- GUGGAUG*CUGAAAC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_23WI_089 not in the Motif Atlas
- Homologous match to IL_7A0S_001
- Geometric discrepancy: 0.0874
- The information below is about IL_7A0S_001
- Detailed Annotation
- Triple sheared with non-canonical cWW
- Broad Annotation
- Triple sheared
- Motif group
- IL_22311.3
- Basepair signature
- cWW-cWW-tSH-tHS-tHS-L-R-cWW
- Number of instances in this motif group
- 11
Unit IDs
23WI|1|A|G|24
23WI|1|A|U|25
23WI|1|A|G|26
23WI|1|A|G|27
23WI|1|A|A|28
23WI|1|A|U|29
23WI|1|A|G|30
*
23WI|1|A|C|510
23WI|1|A|U|511
23WI|1|A|G|512
23WI|1|A|A|513
23WI|1|A|A|514
23WI|1|A|A|515
23WI|1|A|C|516
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain 0
- Large ribosomal subunit protein bL32
- Chain 5
- Large subunit ribosomal RNA; LSU rRNA
- Chain Q
- 50S ribosomal protein L20
- Chain S
- 50S ribosomal protein L22
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