IL_23WI_094
3D structure
- PDB id
- 23WI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Subtomogram average of 70S ribosome (11x11) using CRYO ARM 300II
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- GGAACUG*CUAAGUAC
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_23WI_094 not in the Motif Atlas
- Homologous match to IL_7A0S_006
- Geometric discrepancy: 0.0807
- The information below is about IL_7A0S_006
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_62167.5
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 16
Unit IDs
23WI|1|A|G|188
23WI|1|A|G|189
23WI|1|A|A|190
23WI|1|A|A|191
23WI|1|A|C|192
23WI|1|A|U|193
23WI|1|A|G|194
*
23WI|1|A|C|201
23WI|1|A|U|202
23WI|1|A|A|203
23WI|1|A|A|204
23WI|1|A|G|205
23WI|1|A|U|206
23WI|1|A|A|207
23WI|1|A|C|208
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain 3
- 50S ribosomal protein L35
- Chain 5
- Large subunit ribosomal RNA; LSU rRNA
- Chain L
- Large ribosomal subunit protein uL15
- Chain X
- 50S ribosomal protein L28
Coloring options: