IL_23WI_099
3D structure
- PDB id
- 23WI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Subtomogram average of 70S ribosome (11x11) using CRYO ARM 300II
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- GAAC*GAGUGAAAAAGAAC
- Length
- 18 nucleotides
- Bulged bases
- 23WI|1|A|A|504, 23WI|1|A|A|508
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_23WI_099 not in the Motif Atlas
- Geometric match to IL_8B0X_075
- Geometric discrepancy: 0.0511
- The information below is about IL_8B0X_075
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_44923.3
- Basepair signature
- cWW-cWS-tSH-L-tWH-cWW-tSS-tSH-L-R-L
- Number of instances in this motif group
- 10
Unit IDs
23WI|1|A|G|481
23WI|1|A|A|482
23WI|1|A|A|483
23WI|1|A|C|484
*
23WI|1|A|G|496
23WI|1|A|A|497
23WI|1|A|G|498
23WI|1|A|U|499
23WI|1|A|G|500
23WI|1|A|A|501
23WI|1|A|A|502
23WI|1|A|A|503
23WI|1|A|A|504
23WI|1|A|A|505
23WI|1|A|G|506
23WI|1|A|A|507
23WI|1|A|A|508
23WI|1|A|C|509
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain 5
- Large subunit ribosomal RNA; LSU rRNA
- Chain S
- 50S ribosomal protein L22
- Chain U
- Large ribosomal subunit protein uL24
Coloring options: