IL_23WI_104
3D structure
- PDB id
- 23WI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Subtomogram average of 70S ribosome (11x11) using CRYO ARM 300II
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- GAAAC*GAGAUAGC
- Length
- 13 nucleotides
- Bulged bases
- 23WI|1|A|G|801, 23WI|1|A|G|805
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_23WI_104 not in the Motif Atlas
- Homologous match to IL_7A0S_015
- Geometric discrepancy: 0.1147
- The information below is about IL_7A0S_015
- Detailed Annotation
- tHW-tHW cross-strand stack
- Broad Annotation
- No text annotation
- Motif group
- IL_73855.3
- Basepair signature
- cWW-L-R-L-R-tWH-L-cWW
- Number of instances in this motif group
- 11
Unit IDs
23WI|1|A|G|674
23WI|1|A|A|675
23WI|1|A|A|676
23WI|1|A|A|677
23WI|1|A|C|678
*
23WI|1|A|G|799
23WI|1|A|A|800
23WI|1|A|G|801
23WI|1|A|A|802
23WI|1|A|U|803
23WI|1|A|A|804
23WI|1|A|G|805
23WI|1|A|C|806
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain 5
- Large subunit ribosomal RNA; LSU rRNA
- Chain E
- 50S ribosomal protein L4
- Chain L
- Large ribosomal subunit protein uL15
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