IL_23WI_109
3D structure
- PDB id
- 23WI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Subtomogram average of 70S ribosome (11x11) using CRYO ARM 300II
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- GGG*CAAUC
- Length
- 8 nucleotides
- Bulged bases
- 23WI|1|A|G|776, 23WI|1|A|A|788, 23WI|1|A|A|789, 23WI|1|A|U|790
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_23WI_109 not in the Motif Atlas
- Geometric match to IL_9E6Q_032
- Geometric discrepancy: 0.0466
- The information below is about IL_9E6Q_032
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_89509.3
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 10
Unit IDs
23WI|1|A|G|775
23WI|1|A|G|776
23WI|1|A|G|777
*
23WI|1|A|C|787
23WI|1|A|A|788
23WI|1|A|A|789
23WI|1|A|U|790
23WI|1|A|C|791
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain 2
- 50S ribosomal protein L34
- Chain 5
- Large subunit ribosomal RNA; LSU rRNA
- Chain C
- Large ribosomal subunit protein uL2
- Chain S
- 50S ribosomal protein L22
Coloring options: