IL_23WI_134
3D structure
- PDB id
- 23WI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Subtomogram average of 70S ribosome (11x11) using CRYO ARM 300II
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- UGAAGAAG*UGUAAAG
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_23WI_134 not in the Motif Atlas
- Geometric match to IL_8B0X_019
- Geometric discrepancy: 0.1451
- The information below is about IL_8B0X_019
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_62329.1
- Basepair signature
- cWW-tSH-tWH-cWH-L-tHW-tSS-tHH-cWW
- Number of instances in this motif group
- 2
Unit IDs
23WI|1|a|U|409
23WI|1|a|G|410
23WI|1|a|A|411
23WI|1|a|A|412
23WI|1|a|G|413
23WI|1|a|A|414
23WI|1|a|A|415
23WI|1|a|G|416
*
23WI|1|a|U|427
23WI|1|a|G|428
23WI|1|a|U|429
23WI|1|a|A|430
23WI|1|a|A|431
23WI|1|a|A|432
23WI|1|a|G|433
Current chains
- Chain a
- RNA (1539-MER)
Nearby chains
- Chain d
- Small ribosomal subunit protein uS4
Coloring options: