IL_23WI_137
3D structure
- PDB id
- 23WI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Subtomogram average of 70S ribosome (11x11) using CRYO ARM 300II
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- GAAGGG*CAUUGAC
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_23WI_137 not in the Motif Atlas
- Homologous match to IL_6CZR_406
- Geometric discrepancy: 0.5606
- The information below is about IL_6CZR_406
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_26564.1
- Basepair signature
- cWW-L-R-tWH-L-R-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
23WI|1|a|G|450
23WI|1|a|A|451
23WI|1|a|A|452
23WI|1|a|G|453
23WI|1|a|G|454
23WI|1|a|G|455
*
23WI|1|a|C|477
23WI|1|a|A|478
23WI|1|a|U|479
23WI|1|a|U|480
23WI|1|a|G|481
23WI|1|a|A|482
23WI|1|a|C|483
Current chains
- Chain a
- RNA (1539-MER)
Nearby chains
- Chain p
- 30S ribosomal protein S16
Coloring options: