IL_23WI_144
3D structure
- PDB id
- 23WI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Subtomogram average of 70S ribosome (11x11) using CRYO ARM 300II
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- UGAAAUCC*GAACUG
- Length
- 14 nucleotides
- Bulged bases
- 23WI|1|a|U|632
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_23WI_144 not in the Motif Atlas
- Homologous match to IL_6CZR_408
- Geometric discrepancy: 0.5963
- The information below is about IL_6CZR_408
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_78349.2
- Basepair signature
- cWW-tSH-L-R-L-R-L-R-L-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
23WI|1|a|U|605
23WI|1|a|G|606
23WI|1|a|A|607
23WI|1|a|A|608
23WI|1|a|A|609
23WI|1|a|U|610
23WI|1|a|C|611
23WI|1|a|C|612
*
23WI|1|a|G|628
23WI|1|a|A|629
23WI|1|a|A|630
23WI|1|a|C|631
23WI|1|a|U|632
23WI|1|a|G|633
Current chains
- Chain a
- RNA (1539-MER)
Nearby chains
- Chain d
- Small ribosomal subunit protein uS4
- Chain h
- Small ribosomal subunit protein uS8
- Chain p
- 30S ribosomal protein S16
- Chain q
- Small ribosomal subunit protein uS17
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