IL_23WI_150
3D structure
- PDB id
- 23WI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Subtomogram average of 70S ribosome (11x11) using CRYO ARM 300II
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- GGGAG*UC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_23WI_150 not in the Motif Atlas
- Homologous match to IL_6CZR_144
- Geometric discrepancy: 0.1354
- The information below is about IL_6CZR_144
- Detailed Annotation
- Left turn
- Broad Annotation
- Left turn
- Motif group
- IL_29346.1
- Basepair signature
- cWW-L-cWW-L-L
- Number of instances in this motif group
- 4
Unit IDs
23WI|1|a|G|774
23WI|1|a|G|775
23WI|1|a|G|776
23WI|1|a|A|777
23WI|1|a|G|778
*
23WI|1|a|U|804
23WI|1|a|C|805
Current chains
- Chain a
- RNA (1539-MER)
Nearby chains
- Chain 5
- Large subunit ribosomal RNA; LSU rRNA
- Chain C
- Large ribosomal subunit protein uL2
- Chain k
- Small ribosomal subunit protein uS11
Coloring options: