IL_23WI_151
3D structure
- PDB id
- 23WI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Subtomogram average of 70S ribosome (11x11) using CRYO ARM 300II
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- CAAAC*GGUAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_23WI_151 not in the Motif Atlas
- Homologous match to IL_6CZR_145
- Geometric discrepancy: 0.139
- The information below is about IL_6CZR_145
- Detailed Annotation
- tSH-tWH-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_17136.6
- Basepair signature
- cWW-tSH-tHW-tHS-cWW
- Number of instances in this motif group
- 16
Unit IDs
23WI|1|a|C|779
23WI|1|a|A|780
23WI|1|a|A|781
23WI|1|a|A|782
23WI|1|a|C|783
*
23WI|1|a|G|799
23WI|1|a|G|800
23WI|1|a|U|801
23WI|1|a|A|802
23WI|1|a|G|803
Current chains
- Chain a
- RNA (1539-MER)
Nearby chains
- Chain 5
- Large subunit ribosomal RNA; LSU rRNA
- Chain k
- Small ribosomal subunit protein uS11
- Chain u
- Small ribosomal subunit protein bS21
Coloring options: