IL_23WI_165
3D structure
- PDB id
- 23WI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Subtomogram average of 70S ribosome (11x11) using CRYO ARM 300II
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- GUUGC*GAACUC
- Length
- 11 nucleotides
- Bulged bases
- 23WI|1|a|U|1126
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_23WI_165 not in the Motif Atlas
- Geometric match to IL_8B0X_050
- Geometric discrepancy: 0.1366
- The information below is about IL_8B0X_050
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_38603.1
- Basepair signature
- cWW-cWS-L-R-L-R-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
23WI|1|a|G|1124
23WI|1|a|U|1125
23WI|1|a|U|1126
23WI|1|a|G|1127
23WI|1|a|C|1128
*
23WI|1|a|G|1144
23WI|1|a|A|1145
23WI|1|a|A|1146
23WI|1|a|C|1147
23WI|1|a|U|1148
23WI|1|a|C|1149
Current chains
- Chain a
- RNA (1539-MER)
Nearby chains
- Chain i
- Small ribosomal subunit protein uS9
- Chain j
- Small ribosomal subunit protein uS10
Coloring options: